Information for 6-CAGTGCYTTMTCT (Motif 6)

T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T
Reverse Opposite:
G C T A T A C G C T G A A C T G C T G A C G T A C T G A C T A G A T G C T G C A T A G C A C G T A C T G
p-value:1e-17
log p-value:-4.031e+01
Information Content per bp:1.672
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif461.9
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets47.4 +/- 22.6bp
Average Position of motif in Background49.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGTGCYTTMTCT----
-ANTCCTTTGTCTNNNN
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGCYTTMTCT
TTAAGTGCTT-----
 A C G T A C G T T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CAGTGCYTTMTCT
-----TCTTATCT
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

Gata4/MA0482.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGTGCYTTMTCT---
-----TCTTATCTCCC
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTGCYTTMTCT
TTRAGTGSYK-----
 A C G T A C G T T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGTGCYTTMTCT-
----NCCTTATCTG
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGTGCYTTMTCT-
----NNCTTATCTN
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGCYTTMTCT
TTGAGTGSTT-----
 A C G T A C G T T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGTGCYTTMTCT--
----TTCTTATCTGT
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGTGCYTTMTCT--
-----YCTTATCTBN
 T G A C C G T A A T C G A C G T A T C G G A T C G A C T A C G T G A C T T G A C A G C T A G T C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C