Information for 3-GTTAATGGGCTTCCTG (Motif 5)

C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
Reverse Opposite:
G T A C C G T A T C A G C T A G T G C A C T G A C A T G G A T C G A T C G T A C G C T A C G A T C A G T T C G A T C G A G A T C
p-value:1e-24
log p-value:-5.556e+01
Information Content per bp:1.571
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.81%
Number of Background Sequences with motif484.8
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets47.3 +/- 24.1bp
Average Position of motif in Background48.7 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTAATGGGCTTCCTG
GTTAATGGCC------
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTTAATGGGCTTCCTG
-NTAATGAGCT-----
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTTAATGGGCTTCCTG
GACGATAATGAGCTTGC--
 A C G T A C G T A C G T C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTAATGGGCTTCCTG
GKTAATGR--------
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GTTAATGGGCTTCCTG-
-------CACTTCCTGT
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GTTAATGGGCTTCCTG--
--------ACTTCCTGNT
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GTTAATGGGCTTCCTG--
--------ACTTCCTGBT
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTAATGGGCTTCCTG
AAACATAATGAGGTTGC--
 A C G T A C G T A C G T C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTAATGGGCTTCCTG
GNNTTAATTGGTTGTT--
 A C G T A C G T C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GTTAATGGGCTTCCTG--
--------ACTTCCTGTT
 C T A G A G C T A G C T G T C A G C T A C G A T A C T G C T A G C T A G G T A C A G C T A C G T G A T C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T