Information for 14-CCTGTAGAGT (Motif 42)

A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
Reverse Opposite:
G T C A G T A C C A G T G T A C A C G T G T C A G T A C C G T A C T A G C T A G
p-value:1e-4
log p-value:-1.137e+01
Information Content per bp:1.753
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif194.9
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets45.7 +/- 26.7bp
Average Position of motif in Background45.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTAGAGT
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTAGAGT
CCACCTGTTGCAT
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTGTAGAGT---
--TGTGGATTNNN
 A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTGTAGAGT
GCTGTG----
 A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTAGAGT
RYHYACCTGB-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTAGAGT
CCCCCTGCTGTG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTGTAGAGT--
NNTGTGGATTSS
 A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------CCTGTAGAGT
NNTNCGCACCTGTNGAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTAGAGT
NCACCTGTN----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTGTAGAGT
GTCTGTGGTTT
 A C G T A G T C A G T C A C G T A C T G A C G T T G C A A C T G G T C A A C T G A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T