Information for 24-GAGCCATAGTCAT (Motif 41)

A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.439e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 28.1bp
Average Position of motif in Background45.6 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GAGCCATAGTCAT-
--------GTCATN
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGCCATAGTCAT
---GAATATTCAT
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGCCATAGTCAT----
TATTCAAGGTCATGCGA
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAGCCATAGTCAT
---GHATATKCAT
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGCCATAGTCAT
---CCTTTGTT--
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAGCCATAGTCAT
---CCATTGTTTT
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGCCATAGTCAT---
-ATGAATATTCATGAG
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGCCATAGTCAT
-AGCCTCAGGCA-
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAGCCATAGTCAT
---CCATTGTTYB
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGCCATAGTCAT
-AGCCTCAGGCA-
 A C T G C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T