Information for 22-TCGTTTTTCTACT (Motif 38)

C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T
Reverse Opposite:
C G T A C A T G C A G T C G T A T C A G C T G A C G T A T C G A C G T A C G T A G T A C T C A G G C T A
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.550
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.5 +/- 8.7bp
Average Position of motif in Background43.8 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCGTTTTTCTACT-
TTTTTTTTCNNGTN
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCGTTTTTCTACT-
ANTCCTTTGTCTNNNN
 A C G T A C G T C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCGTTTTTCTACT--
-NNTTTTTCTTATNT
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T A C G T A C G T
A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCGTTTTTCTACT
NNNNTTTTTTTTTNAAC-
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCGTTTTTCTACT
---ATTTTCCATT
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGTTTTTCTACT----
NNNTTTGTTTACTTTTN
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCGTTTTTCTACT
---ATTTTCCATT
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T
A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGTTTTTCTACT----
NNNTTTGTTTACNTTNN
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGTTTTTCTACT----
NNNTTTGTTTACNTTNN
 C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCGTTTTTCTACT
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T C G A T A G T C C A T G G C A T G C A T A G C T G C A T G A C T A G T C G C A T G T C A G T A C G C A T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T