Information for 12-TTGGTTCAGCCAC (Motif 23)

A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A T C G A G T C A C G T A C T G C G T A C G T A A G T C A T G C G T C A T G C A
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.876
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 21.0bp
Average Position of motif in Background59.6 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC-
--GGACCACCCACG
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC
-NGGATTAN----
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC----
-AGGCTAATCCCCAANG
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TTGGTTCAGCCAC
-------ATCCAC
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TTGGTTCAGCCAC
------CAGCC--
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TTGGTTCAGCCAC---
------AAACCACANN
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC
-----BCAGACWA
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC
--GGATTAGC---
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC----
------AAACCACAGAN
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TTGGTTCAGCCAC
-TGACTCAGCA--
 A C G T A C G T A T C G A C T G G C A T A C G T G T A C C G T A A C T G A T G C A G T C C G T A A G T C
A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T A C G T