p-value: | 1e-32 |
log p-value: | -7.459e+01 |
Information Content per bp: | 1.625 |
Number of Target Sequences with motif | 182.0 |
Percentage of Target Sequences with motif | 25.28% |
Number of Background Sequences with motif | 4667.8 |
Percentage of Background Sequences with motif | 9.77% |
Average Position of motif in Targets | 49.3 +/- 25.6bp |
Average Position of motif in Background | 49.5 +/- 31.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.1 |
Multiplicity (# of sites on avg that occur together) | 1.13 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 1 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGTGCTAAT AGGTGTTAAT |
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Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer
Match Rank: | 2 |
Score: | 0.78 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGTGCTAAT AAGGTGTKAA- |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 3 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGGTGCTAAT--- -TATGCWAATBAV |
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TBX2/MA0688.1/Jaspar
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGTGCTAAT AAGGTGTGAAA |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 5 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGGTGCTAAT--- -WATGCAAATGAG |
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HOXB3/MA0903.1/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGTGCTAAT---- ----NNTAATTANN |
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HOXA2/MA0900.1/Jaspar
Match Rank: | 7 |
Score: | 0.70 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGTGCTAAT---- ----GNTAATTANN |
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EVX1/MA0887.1/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGTGCTAAT---- ----GNTAATTANN |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 9 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTGCTAAT AGGTGTCA-- |
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EVX2/MA0888.1/Jaspar
Match Rank: | 10 |
Score: | 0.70 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AGGTGCTAAT---- ----NNTAATTANN |
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