p-value: | 1e-13 |
log p-value: | -3.027e+01 |
Information Content per bp: | 1.908 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.97% |
Number of Background Sequences with motif | 3.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.0 +/- 31.2bp |
Average Position of motif in Background | 41.3 +/- 5.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCTTAAATCTTCATTC ----GAATATTCAT-- |
|
|
|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTAAATCTTCATTC- --ATGAATATTCATGAG |
|
|
|
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAAATCTTCATTC --TGAATTATGCAT-- |
|
|
|
PB0108.1_Atf1_2/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAAATCTTCATTC --NTTATTCGTCATNC |
|
|
|
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTTAAATCTTCATTC GGTTAAACATTAA--- |
|
|
|
PB0028.1_Hbp1_1/Jaspar
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GCTTAAATCTTCATTC----- -----NNCATTCATTCATNNN |
|
|
|
Tcf7/MA0769.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTAAATCTTCATTC CCTTTGATCTTT---- |
|
|
|
POU4F1/MA0790.1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTAAATCTTCATTC CATTAATTATTCAT-- |
|
|
|
LEF1/MA0768.1/Jaspar
Match Rank: | 9 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTTAAATCTTCATTC AACCCTTTGATCTTT---- |
|
|
|
POU4F2/MA0683.1/Jaspar
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTTAAATCTTCATTC CTCATTAATTATGCAT-- |
|
|
|