Information for 9-GTAAACAAAC (Motif 5)

A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C
Reverse Opposite:
T C A G G A C T G A C T C A G T T C A G A G C T G C A T A C G T C T G A T G A C
p-value:1e-15
log p-value:-3.678e+01
Information Content per bp:1.661
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif754.2
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets43.8 +/- 25.5bp
Average Position of motif in Background50.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---GTAAACAAAC---
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:2
Score:0.91
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:3
Score:0.91
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

FOXO3/MA0157.2/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GTAAACAAAC
GTAAACAA--
 A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C
C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GTAAACAAAC
AAGTAAACAAA-
 A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAAAC--
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--GTAAACAAAC
NDGTAAACARRN
 A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

FOXD1/MA0031.1/Jaspar

Match Rank:8
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GTAAACAAAC
GTAAACAT--
 A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C
A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAAAC--
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----GTAAACAAAC--
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T T G C A C G T A C T G A A G T C G T C A C T G A C T G A A G T C A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G