Information for 22-GGCTGCTTTATAC (Motif 41)

C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C T G A G T C A G T C
p-value:1e-4
log p-value:-1.141e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.8 +/- 12.8bp
Average Position of motif in Background61.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGCTTTATAC
NNNNNNCTTTTATAN
 A C G T A C G T C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGCTTTATAC
NNNNNNCTTTTATAN
 A C G T A C G T C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCTGCTTTATAC
AGCAGCTGCT------
 A C G T A C G T A C G T C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCTGCTTTATAC
ACATGCTACCTAATAC
 A C G T A C G T A C G T C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCTGCTTTATAC
NGCTN--------
 C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCTGCTTTATAC--
---TGATTTATGGCC
 C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCTGCTTTATAC--
---DGWTTTATGRCN
 C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCTGCTTTATAC
AGCAGCTGCTNN----
 A C G T A C G T A C G T C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGCTGCTTTATAC-
---TGATTTATGGC
 C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCTTTATAC
CAGCTGTTTCCT--
 A C G T C T A G A C T G A G T C A C G T A C T G A G T C A C G T A C G T C G A T C G T A A C G T C G T A A G T C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T