Motif 40

Information for 21-CCCCCGCCCCCAG (Motif 40)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.469e+01
Information Content per bp:	1.530
Number of Target Sequences with motif	3.0
Percentage of Target Sequences with motif	0.48%
Number of Background Sequences with motif	0.0
Percentage of Background Sequences with motif	0.00%
Average Position of motif in Targets	33.3 +/- 20.0bp
Average Position of motif in Background	0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)	1.0
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:	1
Score:	0.81
Offset:	0
Orientation:	forward strand
Alignment:	CCCCCGCCCCCAG GCCCCGCCCCC--

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:	2
Score:	0.77
Offset:	1
Orientation:	forward strand
Alignment:	CCCCCGCCCCCAG -CCCCTCCCCCAC

Sp1(Zf)/Promoter/Homer

Match Rank:	3
Score:	0.77
Offset:	-1
Orientation:	forward strand
Alignment:	-CCCCCGCCCCCAG GGCCCCGCCCCC--

EGR1/MA0162.2/Jaspar

Match Rank:	4
Score:	0.76
Offset:	0
Orientation:	forward strand
Alignment:	CCCCCGCCCCCAG- CCCCCGCCCCCGCC

KLF16/MA0741.1/Jaspar

Match Rank:	5
Score:	0.75
Offset:	0
Orientation:	forward strand
Alignment:	CCCCCGCCCCCAG GCCACGCCCCC--

POL003.1_GC-box/Jaspar

Match Rank:	6
Score:	0.75
Offset:	-2
Orientation:	reverse strand
Alignment:	--CCCCCGCCCCCAG NAGCCCCGCCCCCN-

SP2/MA0516.1/Jaspar

Match Rank:	7
Score:	0.75
Offset:	0
Orientation:	forward strand
Alignment:	CCCCCGCCCCCAG-- GCCCCGCCCCCTCCC

SP3/MA0746.1/Jaspar

Match Rank:	8
Score:	0.74
Offset:	0
Orientation:	forward strand
Alignment:	CCCCCGCCCCCAG GCCACGCCCCC--

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:	9
Score:	0.73
Offset:	0
Orientation:	reverse strand
Alignment:	CCCCCGCCCCCAG GCCMCGCCCMCY-

PB0039.1_Klf7_1/Jaspar

Match Rank:	10
Score:	0.73
Offset:	-3
Orientation:	forward strand
Alignment:	---CCCCCGCCCCCAG TCGACCCCGCCCCTAT