p-value: | 1e-7 |
log p-value: | -1.674e+01 |
Information Content per bp: | 1.778 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 3.05% |
Number of Background Sequences with motif | 297.1 |
Percentage of Background Sequences with motif | 0.65% |
Average Position of motif in Targets | 47.8 +/- 24.2bp |
Average Position of motif in Background | 50.0 +/- 29.3bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.88 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTGMCAC-- TGTCTGDCACCT |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 2 |
Score: | 0.86 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGMCAC-- CTGTCTGTCACCT |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGMCAC CTGTCTGG--- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGTCTGMCAC VBSYGTCTGG--- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTGMCAC TWGTCTGV--- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGTCTGMCAC-- NNTNNTGTCTGGNNTNG |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 7 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTCTGMCAC- BTGABTGACAGS |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCTGMCAC GGTCTGGCAT |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTCTGMCAC- NTGATTGACAGN |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGTCTGMCAC NTGTCAN---- |
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