Information for 19-GATGGWATTSTYA (Motif 36)

A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A
Reverse Opposite:
C G A T C T G A C G T A A T C G C G T A C G T A C G A T C G T A A T G C G T A C C G T A A C G T T A G C
p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.736
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets41.4 +/- 26.0bp
Average Position of motif in Background47.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GATGGWATTSTYA
AACAATGNTATTGTT-
 A C G T A C G T A C G T A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GATGGWATTSTYA
------ATTGTT-
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GATGGWATTSTYA
------ATTGTTA
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GATGGWATTSTYA--
------ATTGTTTAN
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GATGGWATTSTYA----
GGAAAAATTGTTAGGAA
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATGGWATTSTYA---
-CTATAATTGTTAGCG
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T A C G T A C G T
A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GATGGWATTSTYA----
---AAAATTGTTATGAA
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATGGWATTSTYA-
CCTTGCAATTTTTNN
 A C G T A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GATGGWATTSTYA-
----CCATTGTTNY
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GATGGWATTSTYA-----
--TTCAATTGTTCTAAAA
 A C T G T G C A C G A T A C T G A T C G C G A T C G T A C G A T A C G T A T G C A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A