Information for 15-AAGGSTAATCAGATWK (Motif 24)

C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
Reverse Opposite:
G T A C C G A T C G T A A C G T A G T C C G A T A C T G G T C A A G C T A C G T C T G A A T C G A G T C G T A C A G C T C G A T
p-value:1e-10
log p-value:-2.409e+01
Information Content per bp:1.727
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 30.5bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:AAGGSTAATCAGATWK-
-----TAATCHGATTAC
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAGGSTAATCAGATWK
----YTAATYNRATTA
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
A C G T A C G T A C G T A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGSTAATCAGATWK
WATGCAAATGAG----
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGGSTAATCAGATWK
---GNTAATTANN---
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
A C G T A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGGSTAATCAGATWK
TATGCWAATBAV----
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGGSTAATCAGATWK
---NNTAATTANN---
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
A C G T A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGGSTAATCAGATWK-
GACGATAATGAGCTTGC
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0094.1_Lhx4/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGGSTAATCAGATWK
CAAAGCTAATTAGNTTN
 A C G T C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAGGSTAATCAGATWK-
-----TAATTNVATTAN
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

HOXA2/MA0900.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGGSTAATCAGATWK
---GNTAATTANN---
 C G T A C T G A A C T G C T A G T A G C A G C T C G T A C T G A C A G T T G A C C G T A C T A G C G T A G A C T G C T A C A T G
A C G T A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G A C G T A C G T A C G T