Information for 7-GTTAACACCT (Motif 2)

A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
Reverse Opposite:
C G T A C T A G C A T G G C A T C T A G G C A T G C A T C T G A C G T A T A G C
p-value:1e-19
log p-value:-4.538e+01
Information Content per bp:1.662
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif9.63%
Number of Background Sequences with motif1034.5
Percentage of Background Sequences with motif2.27%
Average Position of motif in Targets44.9 +/- 27.1bp
Average Position of motif in Background51.4 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GTTAACACCT
ATTAACACCT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GTTAACACCT-
TTTCACACCTN
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GTTAACACCT-
-TTMACACCTT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTTAACACCT
TTTCACACCT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GTTAACACCT
--TCACACCT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GTTAACACCT
--TCACACCT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTTAACACCT-
-TTCACACCTT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GTTAACACCT
KTTCACACCT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GTTAACACCT
--TGACACCT
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GTTAACACCT-
CTTCACACCTA
 A T C G G C A T G A C T C G T A C G T A G A T C C G T A G T A C G A T C G C A T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A