Information for 10-ACMAKGGKRSSTGGGG (Motif 17)

C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C G T A C C G T A A T C G A T G C A G C T G T A C A T G C A G T C G T C A A C G T A C G T A C T G A C G T
p-value:1e-11
log p-value:-2.628e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 36.4bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACMAKGGKRSSTGGGG
AACAAAGG---------
 A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ACMAKGGKRSSTGGGG
NNTNNACAATGGGANNN----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACMAKGGKRSSTGGGG
VRAACAATGG---------
 A C G T A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACMAKGGKRSSTGGGG
ACAAAGGNBCCT----
 C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACMAKGGKRSSTGGGG
GAACAATGGN--------
 A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACMAKGGKRSSTGGGG
RACAAWGG---------
 A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACMAKGGKRSSTGGGG
VRRACAAWGG---------
 A C G T A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACMAKGGKRSSTGGGG
RAACAATGGN--------
 A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACMAKGGKRSSTGGGG
AAAACAATGG---------
 A C G T A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACMAKGGKRSSTGGGG
GAACAATGG---------
 A C G T A C G T C G T A A G T C G T C A C G T A A C G T A C T G A T C G A C T G C T G A A T C G T A G C A C G T A C T G C T A G A C T G A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T