Information for 8-TTGGMAACAAGCTKRG (Motif 15)

C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
Reverse Opposite:
A G T C G A T C G T A C C T G A A T C G A G T C A C G T A C G T C A T G A G C T A C G T A C T G A G T C A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.628e+01
Information Content per bp:1.754
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 21.6bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGGMAACAAGCTKRG
NNTTGGCANN--------
 A C G T A C G T C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGGMAACAAGCTKRG
TTGGCANNNTGCCAAG
 C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGGMAACAAGCTKRG
TTGGCA----------
 C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGGMAACAAGCTKRG
CTTGGCAA---------
 A C G T C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGGMAACAAGCTKRG
NTTGGCANN--------
 A C G T C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGGMAACAAGCTKRG
ATGTAAACADGS----
 C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGGMAACAAGCTKRG
NATGGAAAAN-------
 A C G T C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGGMAACAAGCTKRG
-TGGCACCATGCCAA-
 C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTGGMAACAAGCTKRG
-----NAHCAGCTGD-
 C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGGMAACAAGCTKRG
AATGGAAAAT-------
 A C G T C G A T A C G T A C T G C T A G T G A C G T C A C T G A G A T C G T C A C G T A A C T G A T G C A G C T A C T G C T A G C T A G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T