Information for 6-CAGCCTTTAAGTAAAC (Motif 13)

T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C
Reverse Opposite:
C T A G A C G T G A C T G C A T C G T A T G A C A G C T A C G T G C T A C T G A C G T A C T A G T A C G G T A C C G A T A C T G
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.697
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif16.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.0 +/- 26.1bp
Average Position of motif in Background58.5 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCCTTTAAGTAAAC---
--GGGTTTAATTAAAATTC
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CAGCCTTTAAGTAAAC-
-------AAAGTAAACA
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CAGCCTTTAAGTAAAC-
-------AAAGTAAACA
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PH0011.1_Alx1_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGCCTTTAAGTAAAC---
--CGCATTAATTAATTGGC
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGCCTTTAAGTAAAC--
-ANNATTTAATTAATTNN
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T A C G T
A C G T T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CAGCCTTTAAGTAAAC-
-------WAAGTAAAYA
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGCCTTTAAGTAAAC-----
------CAAAGTAAACANNNN
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PH0100.1_Lmx1a/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAGCCTTTAAGTAAAC--
-NNTTTTTAATTAATTCG
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T A C G T
A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CAGCCTTTAAGTAAAC-
--------AAATAAACA
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CAGCCTTTAAGTAAAC---
-------TAAGTAAACAAA
 T G A C C G T A A C T G A T G C A G T C A C G T A G C T C G A T T G C A C T G A A C T G G A C T C G T A C G T A G T C A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A