Information for 11-GCGTGCCGCC (Motif 18)

T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
Reverse Opposite:
C T A G A C T G A G T C C T A G A T C G T G A C C T G A A T G C A C T G A G T C
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.841
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif799.6
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets50.8 +/- 29.9bp
Average Position of motif in Background48.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCCGCC
TGCGTG-----
 A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGCCGCC
TTGCGTGCVA--
 A C G T A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGCCGCC
NNCGCGTGNN---
 A C G T A C G T A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGCCGCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCCGCC------
TACGCCCCGCCACTCTG
 A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGCCGCC
NNGTCGCGTGNCAC-
 A C G T A C G T A C G T A C G T A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGTGCCGCC-------
--GCCCCGCCCCCTCCC
 T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGTGCCGCC
AGCGCGCC---
 A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGTGCCGCC
GGACGTGC----
 A C G T A C G T T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGTGCCGCC-
NNTTCCCGCCC
 T C A G A G T C A T C G A G C T A C T G A T G C G A T C A C T G G T A C A G T C A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C