Information for 12-YACWGCATGCTGT (Motif 17)

A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C T G A G T C G T C A A C G T A C T G A G T C C G A T A C T G A C G T C T A G
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 20.4bp
Average Position of motif in Background62.1 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:YACWGCATGCTGT----
--NNTCCTGCTGTGNNN
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:YACWGCATGCTGT--
-----CCTGCTGAGH
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----YACWGCATGCTGT
AATCGCACTGCATTCCG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YACWGCATGCTGT----
--TNTCCTGCTGTGNNG
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YACWGCATGCTGT----
--TCNCCTGCTGNGNNN
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YACWGCATGCTGT-
--CCCCCTGCTGTG
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YACWGCATGCTGT-
AACACTGCACATTGTT
 A C G T A C G T A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:8
Orientation:forward strand
Alignment:YACWGCATGCTGT-
--------GCTGTG
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YACWGCATGCTGT-
DCHCAGCAGGRGGCC
 A C G T A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YACWGCATGCTGT-------
---AGGACGCTGTAAAGGGA
 A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A