Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-75 | -1.734e+02 | 0.0000 | 248.0 | 34.73% | 4468.9 | 9.46% | motif file (matrix) |
svg |
2 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-63 | -1.461e+02 | 0.0000 | 81.0 | 11.34% | 381.8 | 0.81% | motif file (matrix) |
svg |
3 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-59 | -1.359e+02 | 0.0000 | 117.0 | 16.39% | 1130.4 | 2.39% | motif file (matrix) |
svg |
4 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-58 | -1.349e+02 | 0.0000 | 216.0 | 30.25% | 4194.0 | 8.88% | motif file (matrix) |
svg |
5 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-51 | -1.178e+02 | 0.0000 | 204.0 | 28.57% | 4185.9 | 8.86% | motif file (matrix) |
svg |
6 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-48 | -1.106e+02 | 0.0000 | 140.0 | 19.61% | 2120.6 | 4.49% | motif file (matrix) |
svg |
7 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-43 | -1.006e+02 | 0.0000 | 121.0 | 16.95% | 1728.3 | 3.66% | motif file (matrix) |
svg |
8 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-43 | -9.979e+01 | 0.0000 | 102.0 | 14.29% | 1211.9 | 2.56% | motif file (matrix) |
svg |
9 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-39 | -9.170e+01 | 0.0000 | 142.0 | 19.89% | 2584.5 | 5.47% | motif file (matrix) |
svg |
10 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-36 | -8.332e+01 | 0.0000 | 123.0 | 17.23% | 2133.0 | 4.51% | motif file (matrix) |
svg |
11 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-33 | -7.749e+01 | 0.0000 | 107.0 | 14.99% | 1737.8 | 3.68% | motif file (matrix) |
svg |
12 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-26 | -6.092e+01 | 0.0000 | 331.0 | 46.36% | 12960.7 | 27.43% | motif file (matrix) |
svg |
13 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-25 | -5.967e+01 | 0.0000 | 104.0 | 14.57% | 2055.2 | 4.35% | motif file (matrix) |
svg |
14 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-23 | -5.350e+01 | 0.0000 | 71.0 | 9.94% | 1103.1 | 2.33% | motif file (matrix) |
svg |
15 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-22 | -5.259e+01 | 0.0000 | 66.0 | 9.24% | 971.9 | 2.06% | motif file (matrix) |
svg |
16 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-18 | -4.282e+01 | 0.0000 | 51.0 | 7.14% | 714.8 | 1.51% | motif file (matrix) |
svg |
17 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-17 | -4.144e+01 | 0.0000 | 220.0 | 30.81% | 8191.2 | 17.33% | motif file (matrix) |
svg |
18 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-15 | -3.473e+01 | 0.0000 | 162.0 | 22.69% | 5651.7 | 11.96% | motif file (matrix) |
svg |
19 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-14 | -3.235e+01 | 0.0000 | 151.0 | 21.15% | 5255.3 | 11.12% | motif file (matrix) |
svg |
20 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-11 | -2.536e+01 | 0.0000 | 98.0 | 13.73% | 3123.7 | 6.61% | motif file (matrix) |
svg |
21 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-10 | -2.492e+01 | 0.0000 | 105.0 | 14.71% | 3479.4 | 7.36% | motif file (matrix) |
svg |
22 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-9 | -2.299e+01 | 0.0000 | 47.0 | 6.58% | 1052.1 | 2.23% | motif file (matrix) |
svg |
23 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-8 | -2.070e+01 | 0.0000 | 33.0 | 4.62% | 619.5 | 1.31% | motif file (matrix) |
svg |
24 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-8 | -2.034e+01 | 0.0000 | 72.0 | 10.08% | 2207.3 | 4.67% | motif file (matrix) |
svg |
25 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-8 | -2.027e+01 | 0.0000 | 49.0 | 6.86% | 1226.8 | 2.60% | motif file (matrix) |
svg |
26 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.875e+01 | 0.0000 | 24.0 | 3.36% | 376.7 | 0.80% | motif file (matrix) |
svg |
27 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.835e+01 | 0.0000 | 62.0 | 8.68% | 1863.4 | 3.94% | motif file (matrix) |
svg |
28 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-7 | -1.787e+01 | 0.0000 | 16.0 | 2.24% | 173.9 | 0.37% | motif file (matrix) |
svg |
29 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-7 | -1.772e+01 | 0.0000 | 29.0 | 4.06% | 561.4 | 1.19% | motif file (matrix) |
svg |
30 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-7 | -1.694e+01 | 0.0000 | 20.0 | 2.80% | 293.6 | 0.62% | motif file (matrix) |
svg |
31 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-7 | -1.682e+01 | 0.0000 | 153.0 | 21.43% | 6622.9 | 14.01% | motif file (matrix) |
svg |
32 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-6 | -1.590e+01 | 0.0000 | 115.0 | 16.11% | 4651.5 | 9.84% | motif file (matrix) |
svg |
33 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-6 | -1.572e+01 | 0.0000 | 46.0 | 6.44% | 1294.0 | 2.74% | motif file (matrix) |
svg |
34 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.495e+01 | 0.0000 | 30.0 | 4.20% | 679.2 | 1.44% | motif file (matrix) |
svg |
35 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-6 | -1.467e+01 | 0.0000 | 37.0 | 5.18% | 964.5 | 2.04% | motif file (matrix) |
svg |
36 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.424e+01 | 0.0000 | 68.0 | 9.52% | 2388.4 | 5.05% | motif file (matrix) |
svg |
37 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-6 | -1.406e+01 | 0.0000 | 46.0 | 6.44% | 1375.4 | 2.91% | motif file (matrix) |
svg |
38 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-6 | -1.385e+01 | 0.0000 | 40.0 | 5.60% | 1125.0 | 2.38% | motif file (matrix) |
svg |
39 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-5 | -1.367e+01 | 0.0000 | 60.0 | 8.40% | 2042.7 | 4.32% | motif file (matrix) |
svg |
40 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.332e+01 | 0.0000 | 49.0 | 6.86% | 1551.0 | 3.28% | motif file (matrix) |
svg |
41 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.275e+01 | 0.0000 | 251.0 | 35.15% | 12917.6 | 27.34% | motif file (matrix) |
svg |
42 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-5 | -1.275e+01 | 0.0000 | 117.0 | 16.39% | 5071.6 | 10.73% | motif file (matrix) |
svg |
43 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-5 | -1.275e+01 | 0.0000 | 118.0 | 16.53% | 5126.7 | 10.85% | motif file (matrix) |
svg |
44 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.274e+01 | 0.0000 | 64.0 | 8.96% | 2299.7 | 4.87% | motif file (matrix) |
svg |
45 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.258e+01 | 0.0000 | 52.0 | 7.28% | 1734.0 | 3.67% | motif file (matrix) |
svg |
46 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.205e+01 | 0.0000 | 40.0 | 5.60% | 1214.1 | 2.57% | motif file (matrix) |
svg |
47 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-5 | -1.165e+01 | 0.0001 | 93.0 | 13.03% | 3885.5 | 8.22% | motif file (matrix) |
svg |
48 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-5 | -1.158e+01 | 0.0001 | 38.0 | 5.32% | 1150.9 | 2.44% | motif file (matrix) |
svg |
49 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -1.120e+01 | 0.0001 | 23.0 | 3.22% | 541.3 | 1.15% | motif file (matrix) |
svg |
50 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-4 | -1.100e+01 | 0.0001 | 42.0 | 5.88% | 1364.6 | 2.89% | motif file (matrix) |
svg |
51 |
| Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer | 1e-4 | -1.095e+01 | 0.0001 | 102.0 | 14.29% | 4446.0 | 9.41% | motif file (matrix) |
svg |
52 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.020e+01 | 0.0003 | 51.0 | 7.14% | 1846.3 | 3.91% | motif file (matrix) |
svg |
53 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -9.425e+00 | 0.0006 | 74.0 | 10.36% | 3095.4 | 6.55% | motif file (matrix) |
svg |
54 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-4 | -9.238e+00 | 0.0007 | 51.0 | 7.14% | 1920.9 | 4.06% | motif file (matrix) |
svg |
55 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -8.765e+00 | 0.0010 | 17.0 | 2.38% | 396.7 | 0.84% | motif file (matrix) |
svg |
56 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-3 | -8.719e+00 | 0.0011 | 78.0 | 10.92% | 3385.9 | 7.16% | motif file (matrix) |
svg |
57 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.925e+00 | 0.0023 | 16.0 | 2.24% | 387.8 | 0.82% | motif file (matrix) |
svg |
58 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-3 | -7.723e+00 | 0.0028 | 44.0 | 6.16% | 1691.7 | 3.58% | motif file (matrix) |
svg |
59 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.684e+00 | 0.0028 | 73.0 | 10.22% | 3230.4 | 6.84% | motif file (matrix) |
svg |
60 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -7.561e+00 | 0.0032 | 50.0 | 7.00% | 2013.7 | 4.26% | motif file (matrix) |
svg |
61 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-3 | -7.136e+00 | 0.0048 | 112.0 | 15.69% | 5515.2 | 11.67% | motif file (matrix) |
svg |
62 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -6.511e+00 | 0.0087 | 42.0 | 5.88% | 1695.2 | 3.59% | motif file (matrix) |
svg |
63 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.479e+00 | 0.0089 | 25.0 | 3.50% | 850.8 | 1.80% | motif file (matrix) |
svg |
64 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -6.367e+00 | 0.0098 | 15.0 | 2.10% | 408.1 | 0.86% | motif file (matrix) |
svg |
65 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -6.363e+00 | 0.0098 | 65.0 | 9.10% | 2950.0 | 6.24% | motif file (matrix) |
svg |
66 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.194e+00 | 0.0113 | 27.0 | 3.78% | 965.3 | 2.04% | motif file (matrix) |
svg |
67 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -5.954e+00 | 0.0141 | 20.0 | 2.80% | 649.2 | 1.37% | motif file (matrix) |
svg |
68 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-2 | -5.845e+00 | 0.0155 | 9.0 | 1.26% | 191.8 | 0.41% | motif file (matrix) |
svg |
69 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.616e+00 | 0.0192 | 42.0 | 5.88% | 1783.8 | 3.77% | motif file (matrix) |
svg |
70 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -5.557e+00 | 0.0201 | 49.0 | 6.86% | 2167.5 | 4.59% | motif file (matrix) |
svg |
71 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.553e+00 | 0.0201 | 63.0 | 8.82% | 2943.5 | 6.23% | motif file (matrix) |
svg |
72 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.507e+00 | 0.0205 | 227.0 | 31.79% | 12878.7 | 27.25% | motif file (matrix) |
svg |
73 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -5.413e+00 | 0.0222 | 65.0 | 9.10% | 3075.0 | 6.51% | motif file (matrix) |
svg |
74 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.135e+00 | 0.0290 | 10.0 | 1.40% | 253.2 | 0.54% | motif file (matrix) |
svg |
75 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.133e+00 | 0.0290 | 55.0 | 7.70% | 2551.5 | 5.40% | motif file (matrix) |
svg |
76 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.123e+00 | 0.0290 | 37.0 | 5.18% | 1569.0 | 3.32% | motif file (matrix) |
svg |
77 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.066e+00 | 0.0298 | 46.0 | 6.44% | 2061.8 | 4.36% | motif file (matrix) |
svg |
78 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.863e+00 | 0.0361 | 56.0 | 7.84% | 2644.0 | 5.60% | motif file (matrix) |
svg |
79 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -4.712e+00 | 0.0414 | 37.0 | 5.18% | 1613.0 | 3.41% | motif file (matrix) |
svg |