Homer Known Motif Enrichment Results (hs_EmbryonicEndoderm_HUES64_normal_NANOG_SRX702043_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 714, Total Background Sequences = 47240
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-75-1.734e+020.0000248.034.73%4468.99.46%motif file (matrix) svg
2 G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-63-1.461e+020.000081.011.34%381.80.81%motif file (matrix) svg
3 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-59-1.359e+020.0000117.016.39%1130.42.39%motif file (matrix) svg
4 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-58-1.349e+020.0000216.030.25%4194.08.88%motif file (matrix) svg
5 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-51-1.178e+020.0000204.028.57%4185.98.86%motif file (matrix) svg
6 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-48-1.106e+020.0000140.019.61%2120.64.49%motif file (matrix) svg
7 A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-43-1.006e+020.0000121.016.95%1728.33.66%motif file (matrix) svg
8 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-43-9.979e+010.0000102.014.29%1211.92.56%motif file (matrix) svg
9 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-39-9.170e+010.0000142.019.89%2584.55.47%motif file (matrix) svg
10 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-36-8.332e+010.0000123.017.23%2133.04.51%motif file (matrix) svg
11 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-33-7.749e+010.0000107.014.99%1737.83.68%motif file (matrix) svg
12 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-26-6.092e+010.0000331.046.36%12960.727.43%motif file (matrix) svg
13 C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-25-5.967e+010.0000104.014.57%2055.24.35%motif file (matrix) svg
14 C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-23-5.350e+010.000071.09.94%1103.12.33%motif file (matrix) svg
15 G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer1e-22-5.259e+010.000066.09.24%971.92.06%motif file (matrix) svg
16 G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-18-4.282e+010.000051.07.14%714.81.51%motif file (matrix) svg
17 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-17-4.144e+010.0000220.030.81%8191.217.33%motif file (matrix) svg
18 A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-15-3.473e+010.0000162.022.69%5651.711.96%motif file (matrix) svg
19 C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-14-3.235e+010.0000151.021.15%5255.311.12%motif file (matrix) svg
20 A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-11-2.536e+010.000098.013.73%3123.76.61%motif file (matrix) svg
21 C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-10-2.492e+010.0000105.014.71%3479.47.36%motif file (matrix) svg
22 C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-9-2.299e+010.000047.06.58%1052.12.23%motif file (matrix) svg
23 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-8-2.070e+010.000033.04.62%619.51.31%motif file (matrix) svg
24 T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-8-2.034e+010.000072.010.08%2207.34.67%motif file (matrix) svg
25 T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer1e-8-2.027e+010.000049.06.86%1226.82.60%motif file (matrix) svg
26 C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-8-1.875e+010.000024.03.36%376.70.80%motif file (matrix) svg
27 G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-7-1.835e+010.000062.08.68%1863.43.94%motif file (matrix) svg
28 C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-7-1.787e+010.000016.02.24%173.90.37%motif file (matrix) svg
29 C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-7-1.772e+010.000029.04.06%561.41.19%motif file (matrix) svg
30 T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer1e-7-1.694e+010.000020.02.80%293.60.62%motif file (matrix) svg
31 C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-7-1.682e+010.0000153.021.43%6622.914.01%motif file (matrix) svg
32 A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer1e-6-1.590e+010.0000115.016.11%4651.59.84%motif file (matrix) svg
33 A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-6-1.572e+010.000046.06.44%1294.02.74%motif file (matrix) svg
34 G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-6-1.495e+010.000030.04.20%679.21.44%motif file (matrix) svg
35 C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer1e-6-1.467e+010.000037.05.18%964.52.04%motif file (matrix) svg
36 A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-6-1.424e+010.000068.09.52%2388.45.05%motif file (matrix) svg
37 C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-6-1.406e+010.000046.06.44%1375.42.91%motif file (matrix) svg
38 A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-6-1.385e+010.000040.05.60%1125.02.38%motif file (matrix) svg
39 A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)1e-5-1.367e+010.000060.08.40%2042.74.32%motif file (matrix) svg
40 T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-5-1.332e+010.000049.06.86%1551.03.28%motif file (matrix) svg
41 C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-5-1.275e+010.0000251.035.15%12917.627.34%motif file (matrix) svg
42 T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-5-1.275e+010.0000117.016.39%5071.610.73%motif file (matrix) svg
43 C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-5-1.275e+010.0000118.016.53%5126.710.85%motif file (matrix) svg
44 T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-5-1.274e+010.000064.08.96%2299.74.87%motif file (matrix) svg
45 T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-5-1.258e+010.000052.07.28%1734.03.67%motif file (matrix) svg
46 T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-5-1.205e+010.000040.05.60%1214.12.57%motif file (matrix) svg
47 T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-5-1.165e+010.000193.013.03%3885.58.22%motif file (matrix) svg
48 C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer1e-5-1.158e+010.000138.05.32%1150.92.44%motif file (matrix) svg
49 T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-4-1.120e+010.000123.03.22%541.31.15%motif file (matrix) svg
50 C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-4-1.100e+010.000142.05.88%1364.62.89%motif file (matrix) svg
51 A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer1e-4-1.095e+010.0001102.014.29%4446.09.41%motif file (matrix) svg
52 T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-4-1.020e+010.000351.07.14%1846.33.91%motif file (matrix) svg
53 T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-4-9.425e+000.000674.010.36%3095.46.55%motif file (matrix) svg
54 A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-4-9.238e+000.000751.07.14%1920.94.06%motif file (matrix) svg
55 T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer1e-3-8.765e+000.001017.02.38%396.70.84%motif file (matrix) svg
56 C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer1e-3-8.719e+000.001178.010.92%3385.97.16%motif file (matrix) svg
57 C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-3-7.925e+000.002316.02.24%387.80.82%motif file (matrix) svg
58 G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-3-7.723e+000.002844.06.16%1691.73.58%motif file (matrix) svg
59 G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.684e+000.002873.010.22%3230.46.84%motif file (matrix) svg
60 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-3-7.561e+000.003250.07.00%2013.74.26%motif file (matrix) svg
61 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-3-7.136e+000.0048112.015.69%5515.211.67%motif file (matrix) svg
62 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-6.511e+000.008742.05.88%1695.23.59%motif file (matrix) svg
63 A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-2-6.479e+000.008925.03.50%850.81.80%motif file (matrix) svg
64 C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-2-6.367e+000.009815.02.10%408.10.86%motif file (matrix) svg
65 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-2-6.363e+000.009865.09.10%2950.06.24%motif file (matrix) svg
66 C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-6.194e+000.011327.03.78%965.32.04%motif file (matrix) svg
67 T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer1e-2-5.954e+000.014120.02.80%649.21.37%motif file (matrix) svg
68 T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer1e-2-5.845e+000.01559.01.26%191.80.41%motif file (matrix) svg
69 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer1e-2-5.616e+000.019242.05.88%1783.83.77%motif file (matrix) svg
70 T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-2-5.557e+000.020149.06.86%2167.54.59%motif file (matrix) svg
71 C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-2-5.553e+000.020163.08.82%2943.56.23%motif file (matrix) svg
72 C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-2-5.507e+000.0205227.031.79%12878.727.25%motif file (matrix) svg
73 A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C TATA-Box(TBP)/Promoter/Homer1e-2-5.413e+000.022265.09.10%3075.06.51%motif file (matrix) svg
74 A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-2-5.135e+000.029010.01.40%253.20.54%motif file (matrix) svg
75 C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-2-5.133e+000.029055.07.70%2551.55.40%motif file (matrix) svg
76 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer1e-2-5.123e+000.029037.05.18%1569.03.32%motif file (matrix) svg
77 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-2-5.066e+000.029846.06.44%2061.84.36%motif file (matrix) svg
78 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-2-4.863e+000.036156.07.84%2644.05.60%motif file (matrix) svg
79 G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer1e-2-4.712e+000.041437.05.18%1613.03.41%motif file (matrix) svg