Information for 16-GCTATTTATCTCC (Motif 28)

A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A A C T G C G T A A C G T C G T A C G T A G T C A A C G T C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 24.1bp
Average Position of motif in Background44.5 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTATTTATCTCC
GCTATTTTTAGC-
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTATTTATCTCC-
GTTAATTANCTCNN
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A

Gata1/MA0035.3/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCTATTTATCTCC
--TTCTTATCTGT
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCTATTTATCTCC
AGATTCTTATCTGT
 A C G T A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTATTTATCTCC
GCTATTTATAGC-
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTATTTATCTCC-
---TCTTATCTCCC
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTATTTATCTCC
GCTATTTTTGGM-
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCTATTTATCTCC
---TCTTATCT--
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTATTTATCTCC
-CTAATTAA----
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTATTTATCTCC
KCTATTTTTRGH-
 A C T G A G T C G A C T C G T A C A G T A C G T A C G T C G T A C G A T A G T C A C G T A G T C A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T