p-value: | 1e-70 |
log p-value: | -1.627e+02 |
Information Content per bp: | 1.697 |
Number of Target Sequences with motif | 84.0 |
Percentage of Target Sequences with motif | 11.76% |
Number of Background Sequences with motif | 343.6 |
Percentage of Background Sequences with motif | 0.73% |
Average Position of motif in Targets | 51.3 +/- 22.4bp |
Average Position of motif in Background | 50.4 +/- 32.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.93 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTSTYATGCAAAT CATTGTTATGCAAAT |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.93 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTSTYATGCAAAT CTTTGTTATGCAAAT |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 3 |
Score: | 0.77 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTSTYATGCAAAT ---TTATGCAAAT |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 4 |
Score: | 0.76 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT ----TATGCAAAT |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 5 |
Score: | 0.76 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT-- ---TTATGCAAATTA |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 6 |
Score: | 0.76 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT--- ----TATGCWAATBAV |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 7 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT---- -TTGTATGCAAATTAGA |
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PH0145.1_Pou2f3/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT---- -TTGTATGCAAATTAGA |
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POU2F1/MA0785.1/Jaspar
Match Rank: | 9 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT- --AATATGCAAATT |
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PH0144.1_Pou2f2/Jaspar
Match Rank: | 10 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTSTYATGCAAAT---- -TTGTATGCAAATTAGA |
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