Information for 7-GCTCCDBCACVCA (Motif 9)

C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G C G A T A C T G T A C G G A T C A C T G A C T G C T G A A C T G A G T C
p-value:1e-5
log p-value:-1.206e+01
Information Content per bp:1.672
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif162.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets29.0 +/- 26.1bp
Average Position of motif in Background51.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCDBCACVCA
GGCTCYAKCAYC--
 A C G T C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCTCCDBCACVCA-
----TBGCACGCAA
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTCCDBCACVCA
GCTCCGCCCMCY-
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GCTCCDBCACVCA
-------CACGCA
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTCCDBCACVCA-----
--CGAAGCACACAAAATA
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTCCDBCACVCA-----
--AGCGGCACACACGCAA
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCDBCACVCA
NAGCCCCGCCCCCN-
 A C G T A C G T C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCTCCDBCACVCA
GCTCGGSCTC---
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCTCCDBCACVCA
GGCCCCGCCCCC--
 A C G T C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTCCDBCACVCA
GCCCCGCCCCC--
 C T A G G T A C A G C T G T A C G T A C C A T G A G T C A G T C C G T A G T A C T A G C G T A C C G T A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T