Information for 24-AGAGAAYCCAAAA (Motif 45)

C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
Reverse Opposite:
C G A T A C G T A C G T A G C T C A T G A C T G C T G A A C G T C G A T A G T C A C G T A G T C C G A T
p-value:1e-1
log p-value:-3.609e+00
Information Content per bp:1.674
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif1599.7
Percentage of Background Sequences with motif4.30%
Average Position of motif in Targets59.2 +/- 23.1bp
Average Position of motif in Background51.4 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAYCCAAAA
AAGATAAGATAACA
 A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAGAAYCCAAAA
AGATAASR-----
 C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAYCCAAAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGAAYCCAAAA
AGATAAGA-----
 C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAYCCAAAA
BCAGACWA-------
 A C G T A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAAYCCAAAA
NAGATAAGNN----
 A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGAAYCCAAAA--
AACGAAACCGAAACT
 C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAAYCCAAAA
NNGAGATAAGA-----
 A C G T A C G T A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAAYCCAAAA
NVAGATAAGR-----
 A C G T A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGAGAAYCCAAAA
GTAAACAAT------
 A C G T A C G T C G T A C T A G C G T A T A C G C G T A G T C A G A C T T G A C G A T C T C G A G T C A T C G A C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T