Information for 21-AACACAAAAACAA (Motif 42)

C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
p-value:1e-2
log p-value:-6.537e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACACAAAAACAA--
CAAACAACAACACCT
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACACAAAAACAA----
AACACCAAAACAAAGGA
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACACAAAAACAA----
-ATATCAAAACAAAACA
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AACACAAAAACAA--
---AAACAAACATTC
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AACACAAAAACAA
---AAATAAACA-
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AACACAAAAACAA-
-----GTAAACAAT
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACACAAAAACAA
ATGTCACAACAACAC
 A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AACACAAAAACAA
-----GTAAACAA
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACACAAAAACAA-
TACTGGAAAAAAAA
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AACACAAAAACAA-------
---ATAAGAACAAAGGACTA
 C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A