Information for 23-GGTTATGTCT (Motif 40)

A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A C G T C G T A C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.537e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background32.5 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTTATGTCT-------
NNTNNTGTCTGGNNTNG
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGTTATGTCT--
----CTGTCTGG
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGTTATGTCT--
----TWGTCTGV
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTTATGTCT
AAGGATATNTN-
 A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGTTATGTCT
AGATTCTTATCTGT
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTTATGTCT
YSTTATCT--
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTTATGTCT--
NGTTACGTAATN
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGTTATGTCT--
--VBSYGTCTGG
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGTTATGTCT
NNCTTATCTN-
 A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTTATGTCT-
TCTTATCTCCC
 A C T G A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C G T A C G T
A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C