Information for 1-ADTCTGTCATCCC (Motif 4)

G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C
Reverse Opposite:
C T A G A C T G A T C G C G T A A C G T C A T G T G C A G T A C G T C A A T C G C T G A G A C T A C G T
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.726
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.0 +/- 19.3bp
Average Position of motif in Background40.1 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ADTCTGTCATCCC-----
-NTTGTTAATCCCTCTNN
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:ADTCTGTCATCCC
-----TTAATCCC
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:ADTCTGTCATCCC-
------TAATCCCN
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:ADTCTGTCATCCC
-----GTCATN--
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ADTCTGTCATCCC----
AATCGTTAATCCCTTTA
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ADTCTGTCATCCC
----CTTAATCCC
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ADTCTGTCATCCC-
----NYTAATCCYB
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:forward strand
Alignment:ADTCTGTCATCCC
-----TTAATCCT
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:ADTCTGTCATCCC
-----YTAATCCY
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ADTCTGTCATCCC-----
-NTAGTTAATCCCCTTAN
 G T C A C G T A G A C T T A G C A C G T A C T G A C G T G T A C G T C A C G A T A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A