Information for 16-CCATGCCTTTCATTGT (Motif 35)

A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.230e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CCATGCCTTTCATTGT-
--------CTCATTGTC
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0070.1_Sox30_1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCATGCCTTTCATTGT-----
-----ANNTCCATTGTTCNNN
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCATGCCTTTCATTGT-----
------CTTTCANTATGACTV
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.56
Offset:9
Orientation:forward strand
Alignment:CCATGCCTTTCATTGT---
---------CCWTTGTYYB
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.56
Offset:10
Orientation:forward strand
Alignment:CCATGCCTTTCATTGT
----------CTTTGT
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCATGCCTTTCATTGT
NNGGCCACGCCTTTN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCATGCCTTTCATTGT-------
-------TTCAATTGTTCTAAAA
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CCATGCCTTTCATTGT---
---------CCATTGTTYB
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCATGCCTTTCATTGT--
---TCACTTTCACTTTCN
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCATGCCTTTCATTGT-------
------CNNNTATTGTTCNNNNN
 A G T C A G T C C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A