Information for 3-TCTGHAACCAGATACA (Motif 3)

C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
Reverse Opposite:
C G A T A T C G C G A T C G T A A C G T A G T C A C G T A C T G A T C G A C G T C G A T C A T G A G T C C G T A C T A G C G T A
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.751
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.5 +/- 31.7bp
Average Position of motif in Background51.6 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTGHAACCAGATACA
ACTGAAACCA------
 C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCTGHAACCAGATACA
---GWAAYHTGAKMC-
 C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCTGHAACCAGATACA
---GWAAYHTGABMC-
 C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TCTGHAACCAGATACA
NNNVCTGWGYAAACASN----
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TCTGHAACCAGATACA
---GTAAACAG-----
 C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--TCTGHAACCAGATACA--
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCTGHAACCAGATACA--
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCTGHAACCAGATACA
CCATTGTATGCAAAT---
 A C G T A C G T C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TCTGHAACCAGATACA
-AAGTAAACAAA----
 C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCTGHAACCAGATACA
AATGTATCAAT-----
 C G A T A G T C A C G T A C T G G A T C C G T A G T C A A T G C G T A C C G T A T C A G G T C A A C G T C G T A A T G C C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T