Information for 12-TCTCCATGATGAT (Motif 29)

A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A C G T A C T G A C T G C G T A A C T G C G T A
p-value:1e-3
log p-value:-7.230e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCATGATGAT-
NNCTNAATTATGANN
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCTCCATGATGAT-----
---TAATGATGATCACTA
 A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCTCCATGATGAT--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCCATGATGAT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCATGATGAT-
ATTTGCATAACAAAG
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTCCATGATGAT
GGCTCYAKCAYC--
 A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCTCCATGATGAT
ATTTTCCATT-----
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCTCCATGATGAT----
-NNTAATTATAATNANN
 A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCCATGATGAT
NNAATTCTCGNTNAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCTCCATGATGAT
ATTTTCCATT-----
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C T G C G T A A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T