Information for 14-TAGGTCACTA (Motif 28)

A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-7.230e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background35.9 +/- 1.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TAGGTCACTA
AAGGTCAC--
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TAGGTCACTA---
-AGGTCTCTAACC
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TAGGTCACTA
AAYTAGGTCA---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TAGGTCACTA
-AGGTCA---
 A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TAGGTCACTA
ATCAAGGTCA---
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------TAGGTCACTA
TATAAGTAGGTCAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAGGTCACTA
TRAGGTCA---
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTCACTA
TCAAGGTCAN--
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAGGTCACTA-----
GTAGGTCACTGGGTCA
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAGGTCACTA
AGRGGTCA---
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T