Information for 5-GGGAAACTAT (Motif 21)

A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.230e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background59.1 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAACTAT
NNTGGAAANN--
 A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAACTAT
AATGGAAAAT--
 A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGAAACTAT
ACTGAAACCA-
 A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAACTAT
CSTGGGAAAD---
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAACTAT
AATGGAAAAT--
 A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGAAACTAT
---NAACAAT
 A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGAAACTAT-------
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGGAAACTAT
GAGAACCGAAACTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGAAACTAT
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGAAACTAT
GGCGGGAARN---
 A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T