Information for 11-AWAWTYMASTKRAWTW (Motif 17)

C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
Reverse Opposite:
C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T C G A C G T A C G T C T A G C T G A C G T A A C G T G C A T A C G T
p-value:1e-4
log p-value:-9.531e+00
Information Content per bp:1.784
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.0 +/- 1.4bp
Average Position of motif in Background55.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AWAWTYMASTKRAWTW
AAATTCAAGTGGNTTN
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AWAWTYMASTKRAWTW
-NANTTCATTGAATTA
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AWAWTYMASTKRAWTW
AATTTCAAGTGGCTTN
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AWAWTYMASTKRAWTW
AANTTCAAGTGGCTTN
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AWAWTYMASTKRAWTW
AATNTTAAGTGGNTNN
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AWAWTYMASTKRAWTW
-----TAATTAAATTA
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PB0169.1_Sox15_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AWAWTYMASTKRAWTW
TNGAATTTCATTNAN---
 A C G T A C G T C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AWAWTYMASTKRAWTW
-----TAATTTAATTA
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AWAWTYMASTKRAWTW
-----TAATTTAATTA
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AWAWTYMASTKRAWTW-
CTTAACCACTTAAGGAT
 C G T A C G T A C G T A C G A T A G C T A G T C G T C A C G T A A T G C A C G T A C G T C T A G C T G A C G T A A C G T G C A T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T