Information for 8-GCTAGWCTCYWCTCAA (Motif 13)

C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A
Reverse Opposite:
A C G T G A C T A C T G C G T A C T A G C G T A C T G A A C T G G C T A T C A G C G T A G A T C C G A T C G T A A C T G G A T C
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.583
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets82.7 +/- 7.8bp
Average Position of motif in Background46.8 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCTAGWCTCYWCTCAA-
-------NSCACTYVAV
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCTAGWCTCYWCTCAA-
------AGCCACTCAAG
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCTAGWCTCYWCTCAA-
-------RSCACTYRAG
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCTAGWCTCYWCTCAA
------AASCACTCAA
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:GCTAGWCTCYWCTCAA
------MRSCACTYAA
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.45
Offset:-1
Orientation:forward strand
Alignment:-GCTAGWCTCYWCTCAA
TACGAGACTCCTCTAAC
 A C G T C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PH0050.1_Hoxa3/Jaspar

Match Rank:7
Score:0.44
Offset:0
Orientation:reverse strand
Alignment:GCTAGWCTCYWCTCAA
ACTAATTANCNCNA--
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A
T C G A A G T C G A C T G T C A C G T A A C G T A C G T C T G A T A G C A G T C C A G T A G T C T C G A G T C A A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:GCTAGWCTCYWCTCAA---
--ANNTNCCCACCCANNAC
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:GCTAGWCTCYWCTCAA-
--TAGAANVTTCTAGAA
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A A C G T
A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.44
Offset:8
Orientation:forward strand
Alignment:GCTAGWCTCYWCTCAA-
--------CCACTTGAA
 C A T G T A G C C G A T C G T A C T A G C G A T A G T C C G A T T A G C A G C T C G A T A G T C G C A T G T A C C T G A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A