Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-437 | -1.007e+03 | 0.0000 | 411.0 | 53.59% | 1172.7 | 2.45% | motif file (matrix) |
svg |
2 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-145 | -3.339e+02 | 0.0000 | 317.0 | 41.33% | 3662.9 | 7.65% | motif file (matrix) |
svg |
3 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-143 | -3.299e+02 | 0.0000 | 407.0 | 53.06% | 6657.4 | 13.91% | motif file (matrix) |
svg |
4 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-142 | -3.277e+02 | 0.0000 | 285.0 | 37.16% | 2886.5 | 6.03% | motif file (matrix) |
svg |
5 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-93 | -2.163e+02 | 0.0000 | 103.0 | 13.43% | 335.2 | 0.70% | motif file (matrix) |
svg |
6 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-52 | -1.205e+02 | 0.0000 | 68.0 | 8.87% | 310.2 | 0.65% | motif file (matrix) |
svg |
7 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-40 | -9.388e+01 | 0.0000 | 109.0 | 14.21% | 1402.0 | 2.93% | motif file (matrix) |
svg |
8 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-39 | -8.984e+01 | 0.0000 | 137.0 | 17.86% | 2302.9 | 4.81% | motif file (matrix) |
svg |
9 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-38 | -8.912e+01 | 0.0000 | 88.0 | 11.47% | 938.2 | 1.96% | motif file (matrix) |
svg |
10 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-37 | -8.746e+01 | 0.0000 | 91.0 | 11.86% | 1032.5 | 2.16% | motif file (matrix) |
svg |
11 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-34 | -7.896e+01 | 0.0000 | 351.0 | 45.76% | 12046.3 | 25.17% | motif file (matrix) |
svg |
12 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-33 | -7.656e+01 | 0.0000 | 105.0 | 13.69% | 1589.1 | 3.32% | motif file (matrix) |
svg |
13 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-31 | -7.280e+01 | 0.0000 | 194.0 | 25.29% | 4917.0 | 10.28% | motif file (matrix) |
svg |
14 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-24 | -5.710e+01 | 0.0000 | 92.0 | 11.99% | 1600.0 | 3.34% | motif file (matrix) |
svg |
15 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-18 | -4.326e+01 | 0.0000 | 158.0 | 20.60% | 4652.2 | 9.72% | motif file (matrix) |
svg |
16 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-15 | -3.676e+01 | 0.0000 | 138.0 | 17.99% | 4098.0 | 8.56% | motif file (matrix) |
svg |
17 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-13 | -3.074e+01 | 0.0000 | 56.0 | 7.30% | 1077.1 | 2.25% | motif file (matrix) |
svg |
18 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-11 | -2.740e+01 | 0.0000 | 72.0 | 9.39% | 1766.8 | 3.69% | motif file (matrix) |
svg |
19 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.629e+01 | 0.0000 | 49.0 | 6.39% | 963.3 | 2.01% | motif file (matrix) |
svg |
20 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-10 | -2.382e+01 | 0.0000 | 25.0 | 3.26% | 297.8 | 0.62% | motif file (matrix) |
svg |
21 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-9 | -2.231e+01 | 0.0000 | 60.0 | 7.82% | 1499.0 | 3.13% | motif file (matrix) |
svg |
22 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-9 | -2.171e+01 | 0.0000 | 73.0 | 9.52% | 2051.3 | 4.29% | motif file (matrix) |
svg |
23 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-8 | -2.062e+01 | 0.0000 | 47.0 | 6.13% | 1067.3 | 2.23% | motif file (matrix) |
svg |
24 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-8 | -2.056e+01 | 0.0000 | 65.0 | 8.47% | 1773.7 | 3.71% | motif file (matrix) |
svg |
25 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-8 | -2.054e+01 | 0.0000 | 86.0 | 11.21% | 2674.5 | 5.59% | motif file (matrix) |
svg |
26 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-8 | -1.918e+01 | 0.0000 | 50.0 | 6.52% | 1233.5 | 2.58% | motif file (matrix) |
svg |
27 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-8 | -1.886e+01 | 0.0000 | 24.0 | 3.13% | 352.7 | 0.74% | motif file (matrix) |
svg |
28 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.838e+01 | 0.0000 | 57.0 | 7.43% | 1545.8 | 3.23% | motif file (matrix) |
svg |
29 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-7 | -1.818e+01 | 0.0000 | 155.0 | 20.21% | 6195.2 | 12.95% | motif file (matrix) |
svg |
30 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-7 | -1.816e+01 | 0.0000 | 54.0 | 7.04% | 1433.3 | 3.00% | motif file (matrix) |
svg |
31 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.727e+01 | 0.0000 | 63.0 | 8.21% | 1850.2 | 3.87% | motif file (matrix) |
svg |
32 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-7 | -1.723e+01 | 0.0000 | 97.0 | 12.65% | 3393.4 | 7.09% | motif file (matrix) |
svg |
33 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-7 | -1.722e+01 | 0.0000 | 44.0 | 5.74% | 1078.1 | 2.25% | motif file (matrix) |
svg |
34 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-7 | -1.689e+01 | 0.0000 | 77.0 | 10.04% | 2488.3 | 5.20% | motif file (matrix) |
svg |
35 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-7 | -1.669e+01 | 0.0000 | 36.0 | 4.69% | 798.5 | 1.67% | motif file (matrix) |
svg |
36 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-7 | -1.655e+01 | 0.0000 | 92.0 | 11.99% | 3205.9 | 6.70% | motif file (matrix) |
svg |
37 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.635e+01 | 0.0000 | 37.0 | 4.82% | 846.7 | 1.77% | motif file (matrix) |
svg |
38 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-6 | -1.572e+01 | 0.0000 | 28.0 | 3.65% | 548.4 | 1.15% | motif file (matrix) |
svg |
39 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-6 | -1.499e+01 | 0.0000 | 46.0 | 6.00% | 1251.1 | 2.61% | motif file (matrix) |
svg |
40 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-6 | -1.423e+01 | 0.0000 | 45.0 | 5.87% | 1245.3 | 2.60% | motif file (matrix) |
svg |
41 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-6 | -1.419e+01 | 0.0000 | 50.0 | 6.52% | 1456.1 | 3.04% | motif file (matrix) |
svg |
42 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-6 | -1.392e+01 | 0.0000 | 28.0 | 3.65% | 601.8 | 1.26% | motif file (matrix) |
svg |
43 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-5 | -1.369e+01 | 0.0000 | 212.0 | 27.64% | 9780.5 | 20.44% | motif file (matrix) |
svg |
44 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-5 | -1.289e+01 | 0.0000 | 91.0 | 11.86% | 3444.9 | 7.20% | motif file (matrix) |
svg |
45 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-5 | -1.264e+01 | 0.0000 | 53.0 | 6.91% | 1672.1 | 3.49% | motif file (matrix) |
svg |
46 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-5 | -1.210e+01 | 0.0000 | 18.0 | 2.35% | 315.3 | 0.66% | motif file (matrix) |
svg |
47 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.099e+01 | 0.0001 | 127.0 | 16.56% | 5488.9 | 11.47% | motif file (matrix) |
svg |
48 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.096e+01 | 0.0001 | 21.0 | 2.74% | 446.4 | 0.93% | motif file (matrix) |
svg |
49 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-4 | -1.075e+01 | 0.0002 | 55.0 | 7.17% | 1885.2 | 3.94% | motif file (matrix) |
svg |
50 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.075e+01 | 0.0002 | 19.0 | 2.48% | 383.6 | 0.80% | motif file (matrix) |
svg |
51 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.055e+01 | 0.0002 | 56.0 | 7.30% | 1946.0 | 4.07% | motif file (matrix) |
svg |
52 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -9.086e+00 | 0.0008 | 277.0 | 36.11% | 14287.3 | 29.86% | motif file (matrix) |
svg |
53 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -9.079e+00 | 0.0008 | 59.0 | 7.69% | 2204.8 | 4.61% | motif file (matrix) |
svg |
54 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -8.946e+00 | 0.0009 | 30.0 | 3.91% | 880.6 | 1.84% | motif file (matrix) |
svg |
55 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -8.824e+00 | 0.0010 | 29.0 | 3.78% | 844.2 | 1.76% | motif file (matrix) |
svg |
56 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-3 | -8.757e+00 | 0.0010 | 86.0 | 11.21% | 3594.2 | 7.51% | motif file (matrix) |
svg |
57 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-3 | -8.188e+00 | 0.0018 | 43.0 | 5.61% | 1510.3 | 3.16% | motif file (matrix) |
svg |
58 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-3 | -7.961e+00 | 0.0022 | 28.0 | 3.65% | 847.8 | 1.77% | motif file (matrix) |
svg |
59 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -7.235e+00 | 0.0044 | 18.0 | 2.35% | 467.8 | 0.98% | motif file (matrix) |
svg |
60 |
| Sp1(Zf)/Promoter/Homer | 1e-3 | -7.227e+00 | 0.0044 | 28.0 | 3.65% | 889.8 | 1.86% | motif file (matrix) |
svg |
61 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.139e+00 | 0.0047 | 27.0 | 3.52% | 850.9 | 1.78% | motif file (matrix) |
svg |
62 |
| KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.873e+00 | 0.0061 | 35.0 | 4.56% | 1232.3 | 2.58% | motif file (matrix) |
svg |
63 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-2 | -6.622e+00 | 0.0077 | 29.0 | 3.78% | 972.9 | 2.03% | motif file (matrix) |
svg |
64 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.613e+00 | 0.0077 | 49.0 | 6.39% | 1933.8 | 4.04% | motif file (matrix) |
svg |
65 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.488e+00 | 0.0085 | 163.0 | 21.25% | 8162.8 | 17.06% | motif file (matrix) |
svg |
66 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.433e+00 | 0.0089 | 38.0 | 4.95% | 1409.2 | 2.94% | motif file (matrix) |
svg |
67 |
| VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer | 1e-2 | -6.335e+00 | 0.0096 | 17.0 | 2.22% | 466.1 | 0.97% | motif file (matrix) |
svg |
68 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.884e+00 | 0.0149 | 80.0 | 10.43% | 3635.1 | 7.60% | motif file (matrix) |
svg |
69 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.799e+00 | 0.0160 | 169.0 | 22.03% | 8647.1 | 18.07% | motif file (matrix) |
svg |
70 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.709e+00 | 0.0172 | 70.0 | 9.13% | 3124.0 | 6.53% | motif file (matrix) |
svg |
71 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-2 | -5.705e+00 | 0.0172 | 82.0 | 10.69% | 3769.4 | 7.88% | motif file (matrix) |
svg |
72 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -5.497e+00 | 0.0207 | 10.0 | 1.30% | 226.3 | 0.47% | motif file (matrix) |
svg |
73 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -5.367e+00 | 0.0233 | 8.0 | 1.04% | 159.7 | 0.33% | motif file (matrix) |
svg |
74 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.338e+00 | 0.0236 | 95.0 | 12.39% | 4539.2 | 9.49% | motif file (matrix) |
svg |
75 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.074e+00 | 0.0304 | 7.0 | 0.91% | 133.6 | 0.28% | motif file (matrix) |
svg |
76 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.073e+00 | 0.0304 | 99.0 | 12.91% | 4807.5 | 10.05% | motif file (matrix) |
svg |
77 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.026e+00 | 0.0310 | 5.0 | 0.65% | 72.3 | 0.15% | motif file (matrix) |
svg |
78 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.012e+00 | 0.0311 | 32.0 | 4.17% | 1239.5 | 2.59% | motif file (matrix) |
svg |
79 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -4.813e+00 | 0.0374 | 123.0 | 16.04% | 6212.1 | 12.98% | motif file (matrix) |
svg |
80 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.747e+00 | 0.0395 | 37.0 | 4.82% | 1515.4 | 3.17% | motif file (matrix) |
svg |