Information for 10-CYTGCTGGGAGGTAAG (Motif 11)

A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
Reverse Opposite:
G T A C C G A T G A C T G T C A A G T C A G T C A C G T A G T C A G T C A T G C G C T A A T C G G T A C G T C A C T G A A T C G
p-value:1e-12
log p-value:-2.936e+01
Information Content per bp:1.701
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets52.0 +/- 19.5bp
Average Position of motif in Background45.4 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CYTGCTGGGAGGTAAG
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CYTGCTGGGAGGTAAG
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CYTGCTGGGAGGTAAG
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CYTGCTGGGAGGTAAG
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CYTGCTGGGAGGTAAG
CCTGCTGAGH------
 A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CYTGCTGGGAGGTAAG
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CYTGCTGGGAGGTAAG
RGSMTBCTGGGAAAT---
 A C G T A C G T A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CYTGCTGGGAGGTAAG
-CTTCTGGGAAA----
 A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CYTGCTGGGAGGTAAG--
-GTATTGGGTGGGTAATT
 A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

GLIS3/MA0737.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CYTGCTGGGAGGTAAG
CTTCGTGGGGGGTC--
 A T G C A G C T A C G T A C T G A T G C C A G T A T C G C T A G T A C G G T C A T A C G C T A G C A G T C T G A C G T A A C T G
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T