Information for 6-MTGGCACAGSCTGCAA (Motif 9)

G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
Reverse Opposite:
A C G T A C G T A T C G T G A C G C T A C T A G A T C G A G T C A G C T A C T G A C G T A T C G A G T C G T A C C T G A A C G T
p-value:1e-10
log p-value:-2.455e+01
Information Content per bp:1.752
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.6 +/- 18.6bp
Average Position of motif in Background54.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MTGGCACAGSCTGCAA
CCAGGAACAG-------
 A C G T G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:MTGGCACAGSCTGCAA
----CACAGN------
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:MTGGCACAGSCTGCAA
-GAGCACAGCAGGACA
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-MTGGCACAGSCTGCAA
AGCGGCACACACGCAA-
 A C G T G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:MTGGCACAGSCTGCAA
-CCACACAGCAGGAGA
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---MTGGCACAGSCTGCAA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:MTGGCACAGSCTGCAA
-CCACACAGCAGGAGA
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:MTGGCACAGSCTGCAA
------CWGGCGGGAA
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:MTGGCACAGSCTGCAA
ATTGCACAATA-----
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:MTGGCACAGSCTGCAA
---TGACAGGTGTCA-
 G T C A A G C T C A T G C T A G A T G C C G T A A G T C C T G A C T A G T A G C A G T C C A G T A C T G A T G C C G T A C G T A
A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T