Information for 3-ATCAGCCACCCAGACA (Motif 6)

T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A
Reverse Opposite:
C A G T A C T G A C G T A G T C A G C T A C T G A C T G A C T G A C G T A C T G C T A G T A G C A C G T A C T G C G T A A C G T
p-value:1e-11
log p-value:-2.654e+01
Information Content per bp:1.754
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.1 +/- 19.8bp
Average Position of motif in Background43.8 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.67
Offset:9
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA-
---------CCAGACAG
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ATCAGCCACCCAGACA-----
----CAAATCCAGACATCACA
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:9
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA---
---------CCAGACRSVB
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA
----CGCCCCCTGACA
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A
A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA-
---------BCAGACWA
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA
------CRCCCACGCA
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA
------TGCCCAGNHW
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA-----
-TCAGCACCATGGACAGCTCC
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATCAGCCACCCAGACA
------ATGCCAGACN
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCAGCCACCCAGACA-----
TTCAGCACCATGGACAGCGCC
 T C G A A C G T T G A C G T C A A T C G A G T C G T A C T C G A A G T C G T A C A G T C C T G A A C T G C G T A G T A C G C T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C