Information for 2-AAGACAGCACCAG (Motif 2)

C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C G T C T A G A G T C A C G T C A T G A C G T A G T C A C G T A C G T
p-value:1e-14
log p-value:-3.444e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.3 +/- 16.7bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGACAGCACCAG--
ADGGYAGYAGCATCT
 C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAGACAGCACCAG
TGAGTCAGCA----
 A C G T C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAGACAGCACCAG----
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGACAGCACCAG
-AGGAAACAGCTG
 C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AAGACAGCACCAG
GCAAAACATTACTA-
 A C G T A C G T C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AAGACAGCACCAG
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------AAGACAGCACCAG
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAGACAGCACCAG--
ATTTACAGTAGCAAAA
 A C G T C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAGACAGCACCAG
--CACAGN-----
 C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAGACAGCACCAG----
----ATGCAACAGGTGG
 C G T A C G T A A C T G C G T A G A T C C G T A A C T G A G T C C G T A T A G C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G