Information for 5-CTTTGTTGCA (Motif 19)

A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.365e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 22.9bp
Average Position of motif in Background46.8 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTGCA
YCTTTGTTCC-
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTGCA
CCWTTGTYYB-
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTGCA--
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTTTGTTGCA
CTTTGT----
 A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGTTGCA--
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTGCA
CCTTTGTT---
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTGCA
CCWTTGTY---
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTGCA
CCTTTGTTTT-
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTTTGTTGCA
CCATTGTTNY-
 A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTTTGTTGCA-
-NATGTTGCAA
 A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A