Information for 4-CWTGYAGCTC (Motif 18)

G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C
Reverse Opposite:
A T C G C G T A C A T G A G T C A C G T C T A G G T A C C G T A C G A T C T A G
p-value:1e-7
log p-value:-1.628e+01
Information Content per bp:1.741
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif8.55%
Number of Background Sequences with motif1607.0
Percentage of Background Sequences with motif3.33%
Average Position of motif in Targets45.4 +/- 23.5bp
Average Position of motif in Background50.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CWTGYAGCTC--
TATAAGTAGGTCAA
 A C G T A C G T G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CWTGYAGCTC-
-ATCAAGGTCA
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CWTGYAGCTC-
-AAYTAGGTCA
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CWTGYAGCTC--
------GCTCCG
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CWTGYAGCTC
-----NGCTN
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CWTGYAGCTC--
--AGCAGCTGCT
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CWTGYAGCTC-
-NAHCAGCTGD
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CWTGYAGCTC---
---GCAGCTGTNN
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CWTGYAGCTC--
----CAGCTGTT
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CWTGYAGCTC--
-NNGCAGCTGTT
 G A T C C G T A C G A T A C T G A G T C C G T A A C T G G T A C A C G T A T G C A C G T A C G T
A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T