Information for 3-GCAGGCAACG (Motif 17)

A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
Reverse Opposite:
G A T C A T C G C G A T A C G T A T C G A G T C A G T C A C G T A C T G G T A C
p-value:1e-7
log p-value:-1.659e+01
Information Content per bp:1.865
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif52.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets62.9 +/- 32.1bp
Average Position of motif in Background47.0 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCAGGCAACG
TBGCACGCAA--
 A C G T A C G T A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCAGGCAACG--
-AAGGCAAGTGT
 A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAGGCAACG
NACAGGAAAT-
 A C G T A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCAACG
NACAGGAAAT-
 A C G T A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCAGGCAACG
ACAGGAAGTG
 A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCAGGCAACG
BCAGACWA--
 A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------GCAGGCAACG
AAGGKGRCGCAGGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCAGGCAACG
-CACGCA---
 A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAGGCAACG
VCAGGTRDRY
 A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAGGCAACG-----
-CAGGCCNNGGCCNN
 A C T G A G T C C G T A A C T G A C T G A T G C C G T A C G T A T A G C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C