Information for 8-GTGAGAATTTAAGACG (Motif 14)

A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G
Reverse Opposite:
A G T C C T A G A C G T A T G C A C G T A C G T G T C A G T C A C G T A A G C T A C G T A G T C A C G T A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 14.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG---
--NNNATTTTACGACNNTN
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG---
--GNNNTTTTACGACCTNA
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG---
---ANNTTTTACGACNTNN
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGAATTTAAGACG
AGGTGTTAAT--------
 A C G T A C G T A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG---
--ANNATTTTACGACNTNA
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG
-----NTTTTACGAC-
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTGAGAATTTAAGACG
GGACTGAATTCATGCC-
 A C G T A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG---
---NNNTTTTACGACNTTN
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG---
---NNGTTTTACGACTTTA
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGAGAATTTAAGACG
-----NTTTTACGAC-
 A C T G A C G T A C T G C G T A C T A G C G T A C T G A A C G T A C G T A C G T C G T A C G T A A T C G G T C A A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T