Information for 1-GTTAATGATTAACKVG (Motif 1)

T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
Reverse Opposite:
A T G C A T C G T G C A C T A G A C G T G A C T C T G A G T C A G C A T A T G C C G T A C A G T A C G T C T G A G T C A A G T C
p-value:1e-32
log p-value:-7.427e+01
Information Content per bp:1.657
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif5.77%
Number of Background Sequences with motif76.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.5 +/- 25.9bp
Average Position of motif in Background50.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACKVG
GTTAATGATTAAC---
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATGATTAACKVG
NGTTAATNATTAACN--
 A C G T T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.93
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACKVG
GTTAATNATTAA----
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GTTAATGATTAACKVG
-TTAATGTTTAACC--
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GTTAATGATTAACKVG
---AATAATT------
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTTAATGATTAACKVG
GATTATTAATTAACTTG
 A C G T T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACKVG
GKTAATGR--------
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0070.1_Hoxc5/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATGATTAACKVG
NNTNATTAATTAATTCG
 A C G T T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACKVG
ATGCATAATTAATGAG
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTTAATGATTAACKVG
ATGAATAATTAATG--
 T C A G C A G T G A C T C G T A G C T A A C G T T A C G C G T A A C G T A G C T C T G A T G C A G A T C A C G T T A G C T A C G
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T