Information for 7-GWTABCARGG (Motif 5)

T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G
Reverse Opposite:
T G A C A T G C A G C T C G A T A C T G T G A C G C A T T C G A G C A T A G T C
p-value:1e-15
log p-value:-3.651e+01
Information Content per bp:1.690
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif7.31%
Number of Background Sequences with motif760.9
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets42.5 +/- 25.6bp
Average Position of motif in Background51.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GWTABCARGG-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GWTABCARGG-----
-----CAAGGHCANV
 T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GWTABCARGG----
GTTGCCATGGNAAC
 T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GWTABCARGG---
GGTTGCCATGGCAA
 A C G T T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GWTABCARGG---
NGTTGCCATGGCAA
 A C G T T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GWTABCARGG---
---NTCAAGGTCA
 T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GWTABCARGG---
---BTCAAGGTCA
 T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GWTABCARGG-----
CGTTGCCATGGCAACN
 A C G T T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C G T A G A T C T A C G

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GWTABCARGG--
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T A C G T T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GWTABCARGG
CTGTTGCTAGGS
 A C G T A C G T T C A G C G T A A G C T C G T A A C T G T G A C G C T A T C G A T A C G A C T G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G