Information for 3-TVTTTACCTTCAGAKW (Motif 3)

G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
Reverse Opposite:
C G A T G T C A C G A T A G T C C G A T A C T G G C T A C G T A A C T G C T A G C G A T C G T A G T C A T C G A A G T C C G T A
p-value:1e-16
log p-value:-3.834e+01
Information Content per bp:1.723
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 29.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TVTTTACCTTCAGAKW
NNACTTACCTN------
 A C G T G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TVTTTACCTTCAGAKW
NTTGTTTACGTTNN----
 A C G T A C G T G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TVTTTACCTTCAGAKW
TGTTTACTTT------
 G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TVTTTACCTTCAGAKW
NNNTTTGTTTACNTTNN----
 A C G T A C G T A C G T A C G T A C G T G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T A C G T A C G T A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TVTTTACCTTCAGAKW
NNNTTTGTTTACNTTNN----
 A C G T A C G T A C G T A C G T A C G T G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TVTTTACCTTCAGAKW
TGTTTACTTT------
 G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TVTTTACCTTCAGAKW
--ATGACCTTGA----
 G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TVTTTACCTTCAGAKW
TRTTTACTTW------
 G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TVTTTACCTTCAGAKW
NNNTTTGTTTACATTTN----
 A C G T A C G T A C G T A C G T A C G T G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TVTTTACCTTCAGAKW
NNNTTTGTTTACATTTN----
 A C G T A C G T A C G T A C G T A C G T G A C T T A C G A C G T A C G T C G A T C G T A A G T C A G T C A C G T C A G T G T A C C G T A C T A G C G T A A C G T C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T A C G T A C G T