Information for 19-ARYRATAGGY (Motif 26)

C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
Reverse Opposite:
C T A G A T G C A G T C A C G T G T C A A C G T A G T C C T G A A G T C A C G T
p-value:1e-6
log p-value:-1.555e+01
Information Content per bp:1.778
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif191.7
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets65.0 +/- 22.5bp
Average Position of motif in Background51.2 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ARYRATAGGY
GAACAATGG--
 A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ARYRATAGGY--
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ARYRATAGGY
TGAGTGACAGSC
 A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ARYRATAGGY----
NNATTGACAGGTGCTT
 A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ARYRATAGGY
CCAAAAATAG--
 A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ARYRATAGGY-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ARYRATAGGY
DCYAAAAATAGM-
 A C G T A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------ARYRATAGGY-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ARYRATAGGY
GCTATAAATAGC-
 A C G T A C G T A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ARYRATAGGY
GAACAATGGN-
 A C G T C G T A C T A G A G C T C T A G G T C A A C G T C G T A A C T G A T C G G A T C
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T