Information for 19-CACAAAGATTTGC (Motif 25)

G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
Reverse Opposite:
C T A G G T A C C G T A C G T A C T G A C G A T G T A C C G A T A C G T A C G T A T C G A C G T C A T G
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.812
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.4 +/- 31.4bp
Average Position of motif in Background46.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CACAAAGATTTGC
-ACAAAG------
 G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGATTTGC
VRRACAAWGG-----
 A C G T A C G T G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACAAAGATTTGC
--CNGTGATTTN-
 G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGATTTGC
GGAACAAAGR-----
 A C G T A C G T G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAGATTTGC
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAAAGATTTGC
RACAAWGG-----
 G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CACAAAGATTTGC-
---AAGGATATNTN
 G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAGATTTGC
AGAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACAAAGATTTGC
-ACAAAGGNBCCT
 G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAGATTTGC
ATAAGAACAAAGGACTA-
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A A T G C C G T A C G T A C G T A A C T G C G T A A G C T C G A T A C G T A C T G A G T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T