Information for 10-CCGTAATCTC (Motif 23)

A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C G T A C G T G C T A G T A C C A T G A C T G
p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.887
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.9 +/- 25.9bp
Average Position of motif in Background43.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCGTAATCTC
--YTAATCCY
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCGTAATCTC--
--CAAATCACTG
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGTAATCTC
-CTTAATCCC
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGTAATCTC-
-NYTAATCCYB
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCGTAATCTC
--TTAATCCC
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGTAATCTC
--TTAATCCT
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCGTAATCTC
-YSTTATCT-
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C
A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCGTAATCTC------
-NNAATTCTCGNTNAN
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGTAATCTC------
-AGTATTCTCGGTTGC
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGTAATCTC-
-GCTAATCCCC
 A G T C G T A C A C T G C A G T C G T A C G T A A C G T A G T C A C G T A G T C A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C